SRX099183
GSM801012: VCS2 AR DHT 4h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
VCS2
NA
NA

Attributes by original data submitter

Sample

source_name
prostate cancer Cells
treatment
DHT for 4h
passages
14-17
chip antibody
AR
cell line
VCS2
chip antibody manufacturer
Santa Crus

Sequenced DNA Library

library_name
GSM801012: VCS2 AR DHT 4h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17347300
Reads aligned (%)
94.8
Duplicates removed (%)
35.3
Number of peaks
27257 (qval < 1E-05)

hg19

Number of total reads
17347300
Reads aligned (%)
94.3
Duplicates removed (%)
36.1
Number of peaks
27230 (qval < 1E-05)

Base call quality data from DBCLS SRA